Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCYASSGKP-YPEELSSEQWILVMQKLAAHG-VADITL-TGGEAKLIKGFKELVVVASSL--FTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMDNTHDQLRGRKGGFKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGFKALDIDFEEMVQIQLREARHKWGDRLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQL-ED--LPLGHILEDSMADIGSPARLLQLKC---------EAKNCKCIGKIELSEPDLPFQKEVKAGIQE |
| 4M7T Chain:A ((21-261)) | -----------------------------------------------------------------------------------------------------MDKLFSMIEVEVNSQCNRTCWYCPNSVSKRKETGEMDPALYKTLMEQLSSLDFAGRISFHFYGEPLLCKNLDLFVGMTTEYIPRARPIIYTNGDFLTEKRLQTLTELGIQKFIVTQHAGAKH---------KFRGVYDQLAGA---DKEK-----------------VVYLD---H-----SDLVLSNRG------------GILD-N-------IP---------------ANMSCMVPSNLAVVTVLGNVLPCFEDFNQKMVMGNIGEQHISDIWHNDKFTSFRKMLKEGHRGKSDLCKNCNNVSVQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86602 for 1725 contacts (-50.2/contact) +
2D Compatibility (PS) -23390 + (NN) -9167 + (LL) 13748
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -114761.0 ( -66.53 by residue)
QMean score : 0.310
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