Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGS---GKDTFVFMSGSGIAAPAYEMKGLYSKFSKENKIAVVDRAGYGYSEVSHDDRDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVTYKLS-GVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGTHSIYLYQPDQIYKLSMEFMRKVR |
2XUA Chain:A ((5-264)) | ---------------------------------------------PYAAVNGTELHYRIDGERHGNAPWIVLSNSLGTDL--SMWAPQVAALSKHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVLGLMDTLKIA-RANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADA-VLPRWFTADY--------MEREPVVLAMIRDVFVHT-DKEGYASNC-EAIDAADLRPEAPG-IKVPALVISGTHDLAA-----TPAQ-G-RELAQAIAGARYVELDASHISNIERADAFTKTVVDFLTE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46377 for 2361 contacts (-19.6/contact) +
2D Compatibility (PS) -27158 + (NN) -9624 + (LL) 6596
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -83363.0 ( -35.31 by residue)
QMean score : 0.426
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