Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYIPCMITIGNFICGLLAIHSLLYHNIHSAVLFIFTGMFLDFFDGMAARKLNAVSDMGRELDSFADLVTFGVAPSMLAYSVALYTLPFIGILCALTYSICGMLRLSKFNIEQSKLPTFIGMPIPFAGMCLVILSFTYNPILLAIGTCGLSYLMVSKIKFPHFKKHAAENLESGRWN--
4IUM Chain:A ((1-127))-GYNP----PGDGACGYRCLAFMNGATVVSA--GCSSDLWCD--DELAYRVFQLSPTFTVTIPGG------RVCPN------AKYAMICDK---------------QHWRVKRAKGVGLCLDESCFRGIC----------------NCQRMSGPPPAPVSAAVLDHILEAATFGNVRVV


General information:
TITO was launched using:
RESULT:

Template: 4IUM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 641 -83306 -129.96 -666.44
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -129.96
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.164

(partial model without unconserved sides chains):
PDB file : Tito_4IUM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IUM-query.scw
PDB file : Tito_Scwrl_4IUM.pdb: