Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MRQEELTIHKALPADGDWKSLLFQPLPERDHYETAQGLSFSRLAGQILGTPIDETDYYNE--LYELSVNDRITILSETLDKTIEPETFQKLQHIHSINQKEKGLSVSRFVAFLDGEKLIAKHSNPLMHRHLRKALMTLLHTFADSHEKGLNHPDFRRVLLDVSKFSLNHLNPWLEKTDIEREMPKVVWYGDATKSQLYFLYYLMLVGCDVLLFHPAGTDQLALVDPKQELGFTEKLPDVSELQPFPKEKPDRKSTVAYRSTKEIEHVLNHEESMLYKPWQFRDHTPVSVTLKTTYDELFLITKERAFIRPNFKADKHSIEIPNVFAKIMGVSKDNKEYWNRLHTL-ADYQETEM--VRSFPF-TEEIKSNYQFHYSHALDQEGNIDPDKLMASNVWQYKQLPAGVQTAIAKTISRMCRYPRLKALHQEQVKDVQIYLFKQTTNLPANLLKLIQMFDYAQTVPKLVLYHTEMSGGLTRSDAAALLFLNEIGIDII-IYNPPGHQDIEQFIEEDQYDIHWLDDMVFQQDYKEPSLVKRLFRTITQK
3J9O Chain:B ((79-505))VIDKLIDLQVNSIISNDE-FRALEQEWLKVQEVCQE----DYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENT------TNDIIWLTGMGMVAKNSHAPF-------IASIDKSF-------FGVKDLSEITH-IKSFEALLEHPRYKEWNDFRNLDVAA-------------YIGLTVG-DFMLRQPYN----------------------------PENNP-----VQYKLMEGFNEFVDYDKNESYL------WGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKNLVACVYDN-----KGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEF-------VDGFDSANSRLIANLSYTMCISRISHY--IKCVIRDKIGSI-----VDVESIQKILSDWISEFVTTVYQPT--------------PLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIP-----HIQFEGMNTTMTIDTRLEPELFGTNN--


General information:
TITO was launched using:
RESULT:

Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1778 -144022 -81.00 -344.55
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -81.00
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.113

(partial model without unconserved sides chains):
PDB file : Tito_3J9O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J9O-query.scw
PDB file : Tito_Scwrl_3J9O.pdb: