Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLQFQQVGYWYKNKSQPLF--QDINISFQKGKFYTIVGTSGTGKTTFLSLAGGLDAPKEGNILYDGKAVSKIG---LTNFRNQYVSIVFQAYNLLPYMTALQNVTTAM------EITGSKEKNKESYALDMLQKVGINEKQARQKVLTLSGGQQQRVSITRAFCCDTDLIVADEPTGNLDEDTSKEIVRLFQDLAHKEDKCVIMVTHDEQIAKVSDINIRLSRGSFTVKENVAVV
3TIF Chain:B ((1-229))--MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKR---ALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEKL---


General information:
TITO was launched using:
RESULT:

Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1150 -123857 -107.70 -568.15
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -107.70
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_3TIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TIF-query.scw
PDB file : Tito_Scwrl_3TIF.pdb: