Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDFSLELPVRTNKPRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTSLL--TKDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHR----YCTYFGCEYIEISNGTLPMTNKEKAAYIADFSD-EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSSSGDVRFQIVDDIISSDIDINRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTFFL
3EWW Chain:A ((31-149))----------------ETNLCLSADVSL-ARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFENRKFADIG---NTVKKQYEGGIFKIAS-WADLVNAHVVPG---SGVVKGLQEVGLPLHRGCLLIA--------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 479 -74504 -155.54 -665.21
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -155.54
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_3EWW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EWW-query.scw
PDB file : Tito_Scwrl_3EWW.pdb: