Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQLSKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS
3JTP Chain:D ((6-98))-----------------------------------------------------------------------------------------------------------------------------KLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENRYYLYVDFCDMTDEEVENQLSIMLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS


General information:
TITO was launched using:
RESULT:

Template: 3JTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 414 -64323 -155.37 -691.64
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain D : 0.77

3D Compatibility (PKB) : -155.37
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.705

(partial model without unconserved sides chains):
PDB file : Tito_3JTP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JTP-query.scw
PDB file : Tito_Scwrl_3JTP.pdb: