Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MFHLLGAQQNQKLKRRRFFCPVCGGELAVK-----LGLQKAPHFAHKQNKSCAIDIEP---------ESAYHLEGKRQLYV--------------------------WLKTQRASPILEP-----YIRTINQRP----------DVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGII----------------PQWIMGYSRLKRTASSFYQLSTFHWQFINASPYR-----ELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPK----------PSIQYSGWTKAIHRFRHKPHRF-----NSKETNRLRLL-------FYEKRQTPFSFLPTEV---FVPVRKGAVFKSPVF------VWQ------------------GFLYLFMTDLGGKRAPIRF---SAVLQQCKLHIH---NKNIALRSECSEECLSEAVKQYIDFLCK-------------KGFLRETQKEVYVLNQPAGGIH-SMQDLIERDRSCFIE----------
4K3C Chain:A ((262-793))YNISEMRIIGDTQKLDNELNQLLTHFKAGQLFRKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANISGKLTLPGSDNKYYQVGTNFSGYIPLNSEHKWVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRGFAGGSIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF


General information:
TITO was launched using:
RESULT:

Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1414 -39339 -27.82 -105.47
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -27.82
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.062

(partial model without unconserved sides chains):
PDB file : Tito_4K3C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K3C-query.scw
PDB file : Tito_Scwrl_4K3C.pdb: