Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLYMSVDMEGISGLPDDTFVDSGKRNYERGRLIMTEEANYCIAEAFNSGCTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMVEGLDDTFRGALFLGYHARAST-PGVMSHSMIFGVRHFYINDRPVGELGLNAYVAGYYDVPVLMVAGDDRAAKEAEELI-PNVTTAAVKQTISRSAVKCLSPAKAGRLLTEKTAFALQNKDKVKPLTPPDRPVLSIEFANYGQAEWANLMPGTEIKTGTTTVQFQAKDMLEAYQAMLVMTELAMRTSFC
1Q6Z Chain:A ((5-148))--------------------------------------HGTTYELLRRQGIDTVFGNPGSN--ALPFLKDFPEDFRY----------ILALQEACVVGIADGYAQASRKPAFINLHSAAG-TGN-AMGAL---------SNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASM-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 632 -55194 -87.33 -388.69
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -87.33
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.251

(partial model without unconserved sides chains):
PDB file : Tito_1Q6Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q6Z-query.scw
PDB file : Tito_Scwrl_1Q6Z.pdb: