Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALFTAKVTARGGRAGHITSDDGVLDFDIVMPN-AKKEGQTGTNPEQLFAAGYAACFGGALEHVA--KEQNIEIDSEIEGQVSLMKDESDGGFKIGVTLVVNTKDLDREKAQELVNAAHEFCPYSKATRGNVDVKLELK
1N2F Chain:B ((6-141))-ALYTATATATGGRDGRAVSSDGVLDVKLSTPREMGGQGGAATNPEQLFAAGYSACFIGAMKFVAGQRKQTLPADASITGKVGI--GQIPGGFGLEVELHINLPGMEREAAEALVAAAHQVCPYSNATRGNIDVRLNVS


General information:
TITO was launched using:
RESULT:

Template: 1N2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 521 -58534 -112.35 -440.10
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -112.35
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_1N2F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N2F-query.scw
PDB file : Tito_Scwrl_1N2F.pdb: