Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------MKKTFVKKAMLTTAAMTSAALLTFGPDAASAKTPVDNTAVQLQHQ----ASTNEDLNTFI----DILNQCIYEQDGVYYFDSEKAVEL-GMTKEEAQVIATLWEST-----SEFFSIVSQCVYLEDGNYKFDTEKAVELGFTEKEALALEQFFSAVSLKIHILQAAIVLQDDVYSYDKDAALQAGATPLQADVYEKLFSALSQEQLAAIYDMIHPQA------------
4Q0W Chain:A ((1-362))GVHSFWDIAGPTARPVRLESLEDKRMAVDASIWIYQFLKAVRDQNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKREDEVTMDMIKEVQ---ELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEFGNLKNFKDWYNNGQFDKRKQETENKF--EKDLRKKLVNNEIILDDDFPSVMVYDAYMR--PEVDHDTTPFVWGVPDLDMLRSFMKTQLGWPHEKSDEILIPLI


General information:
TITO was launched using:
RESULT:

Template: 4Q0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 584 -27185 -46.55 -138.70
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -46.55
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_4Q0W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q0W-query.scw
PDB file : Tito_Scwrl_4Q0W.pdb: