Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLTPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNELDERIGHFANIEETLNKSILVAQEAAEDVKRNSQKEAKLIVREAEKNADRIINESLSKSRKIAMEIEELKKQSKVFRTRFQMLIEAQLDLLKNDDWDHLLEYEVDAVFEEKE
1TCF Chain:A ((52-111))------------------------------------------KEELDAIIEEVDEDGSGTIDFEEFL---VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYID-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1TCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 57 118 2.06 1.96
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 2.06
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_1TCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TCF-query.scw
PDB file : Tito_Scwrl_1TCF.pdb: