Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE
4P86 Chain:C ((4-181))--QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLS----NDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYEN-


General information:
TITO was launched using:
RESULT:

Template: 4P86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 898 -124860 -139.04 -717.59
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain C : 0.99

3D Compatibility (PKB) : -139.04
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.630

(partial model without unconserved sides chains):
PDB file : Tito_4P86.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P86-query.scw
PDB file : Tito_Scwrl_4P86.pdb: