Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPELRERIKNVAEKTLEDEVKSLSLDE-VIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAV-EKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS
3BNV Chain:A ((33-150))--------------------------------------------------------------------PELNTSLAGTIIEIDKN-YAKSILITTSEMVADDQGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYAPLKLGDVLELEAHALFDET--SKKRDVKVVGHVKEIKMFEGTIQVVSTDE-


General information:
TITO was launched using:
RESULT:

Template: 3BNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 -64302 -111.44 -554.33
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -111.44
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_3BNV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BNV-query.scw
PDB file : Tito_Scwrl_3BNV.pdb: