Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITYVFPGQGSQKQGMGSGLFD--EFKELTDQADEILGYSIKRLCLENPYSNLNKTQFTQPALYVVNALSYLKKIRDEEVKPDFV------AGHSLGEYNALFAAEAFDFETGLQLVRKRGELMSLISNG---GMAAVMGLNEEQVAKALKEYHLHD---------VDIANVNAPYQIVISGKKDEI---EKAASLFETMTEVTMVLPLNVSGAFHSRYMNKAKEEFEEFLHAFYFSPPSIPVISNVYAKPYTYE-FMKQTLADQINHSVKWTDSIS--YLMKKGH--MEFEEVGPGNVLTGLIHRIKKDAEAMPR
2C2N Chain:A ((30-329))----LFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQPAIFVAS-LAAVEKL--HHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEAMQEASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISGHQEALRFLQKNSSKFHFRR--TRMLP--VSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQA-----


General information:
TITO was launched using:
RESULT:

Template: 2C2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1488 -152056 -102.19 -559.03
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -102.19
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_2C2N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2C2N-query.scw
PDB file : Tito_Scwrl_2C2N.pdb: