Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVQII-FDSKTGNVQRFVNKTGFQQIR-KVDEMDH--VDTPFVLVTYTTN----FGQVPASTQSFL--EKYAHLLLGVAASGNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
3N39 Chain:D ((23-139))--QLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 3N39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 459 -60461 -131.72 -565.06
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -131.72
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_3N39.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N39-query.scw
PDB file : Tito_Scwrl_3N39.pdb: