Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNTLDVLKARASVKEYDTNAPISKEELTELLDLATKAPSAWNLQHWHFTVFHSDESKAEL--LPVAYNQKQIVESSAVVAILGDLKANENGEEVYAELASQGYITDEIKQTLLGQINGAYQ--SEQFARDSAFLNASLAAMQLMIAAKAKGYDTCAIGGFNKEQFQKQFDIS-ERYVPVMLISIGKAVK-PAHQSNRLPLSKVSTWL
4QLY Chain:B ((17-207))-----DVMFNRHSVRQFDPNVKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMKFNYPQVDSASAIVFIAGDTQSHYVYRDVWNKVYEDGNITKERLDQILGTFLPLYENATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGIDFEKMIPTLGLDPKRYVPVMGIAIGKAAQEPLHTT------------


General information:
TITO was launched using:
RESULT:

Template: 4QLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 848 -26719 -31.51 -144.43
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -31.51
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4QLY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QLY-query.scw
PDB file : Tito_Scwrl_4QLY.pdb: