Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSYPESLKKETEEIKERV---RNGNIKEDKIKEIAETTVEFLKSEEKRHKYFSEVAAAMADNLS----EFFKSYLKGE
3VIQ Chain:B ((13-78))-------LEQQKEQLESSLQDALAK-LKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVELFDR-----


General information:
TITO was launched using:
RESULT:

Template: 3VIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 22 4356 198.00 73.83
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : 198.00
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.639

(partial model without unconserved sides chains):
PDB file : Tito_3VIQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VIQ-query.scw
PDB file : Tito_Scwrl_3VIQ.pdb: