Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------MNIFVDQDNYKEVSLKLTKKL-----LTSEHYQFLLCFKGEKLDITISVTPQSLVK-LRDDINELIFMFSD-------------------
1JI8 Chain:A ((1-111))MPVKCPGEYQVDGKKVILDEDCFMQNPEDWDEKVAEWLARELEGIQKMTEEHWKLVKYLREYWETFGTCPPIKMVTKETGFSLEKIYQLFPSGPAHGACKVAGAPKPTGCV


General information:
TITO was launched using:
RESULT:

Template: 1JI8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 166 10011 60.31 154.02
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 60.31
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.217

(partial model without unconserved sides chains):
PDB file : Tito_1JI8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JI8-query.scw
PDB file : Tito_Scwrl_1JI8.pdb: