Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMENIALESSFLEYDINEPIKIYTGHFTIEVADDFFEILGEVKIAFLPKARLIFEGAISGNLSKLFEFEKAMKSNNMMINVPGFMKSEVLI-SGITDGSKGNKVSGILKRSILTSAETKVNRMEFTVVNFVNDLGRRIVHGRFKFSGRTKLKYKDWEIILDKRYDYSNKKIFDRLKNSGGYLITHVGYLKRVDDKLFDTKEVEPLISGLYWLLSFSAGRHVAIPTLEGYHNEEVIWSKYQVPLIDGWTNNITWFPKQKSPSLEHLFPKVIEKQEDPFWNKVLWEVLSWYSQAHSSSIVENKVVSVQVALETLAWVYLIVDRKSNISKSKYKYMNAAEKFREILSRFSIDLSIPKLFIDIKDNYDDGPHLFTVFRNKIVHPTRELDFDNPIDKLHVLYLGVWYLELLTLGILGYEGSYVNRLKVPIIEGVYEFVPWKTRDN
1VD5 Chain:A ((1-377))----------MWQQAIGDALGITARNLKKFGDRFPHVSDGSNKYVLNDNTDWTDGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHDIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRADA-GIIQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDS----SYHTFYFDPENGNAIRGGTHQGN-TDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARVPE--------DGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRDGYAER---------------DDGEAEGFIRRGSYHVRGGISPDDY-----TIWGDYYYLEALLRLERGVTGYWYERGR------------------


General information:
TITO was launched using:
RESULT:

Template: 1VD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2327 -73054 -31.39 -194.29
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -31.39
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_1VD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VD5-query.scw
PDB file : Tito_Scwrl_1VD5.pdb: