Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVIKGLTAGLIFLFLCACGGQQIKDPLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTLK
4NMU Chain:A ((8-146))------------------------KMQIGKEAPNFVVTDLEGKKIELKDLKGKGVFLNFWGTWCK-PCEKEMPYMNELYPKYKEKG--VEIIALDADE---TDIAVKNFVNQYGL---KFPVAIDK--G--QKIIGT-YGVGPLP-----------TSFLIDKDGKVVEQIIGEQ--TKEQLEGYLKKIT---


General information:
TITO was launched using:
RESULT:

Template: 4NMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 682 -70131 -102.83 -504.54
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -102.83
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.592

(partial model without unconserved sides chains):
PDB file : Tito_4NMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NMU-query.scw
PDB file : Tito_Scwrl_4NMU.pdb: