Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPTEIYVDGASAGNPGPSGIGIFIKHE--GKAESFSIPIGVHTNQEAEFLALIEGMKLCATRGYQ----SVSFRTDSDIVERATE-LEMVKNITFQPFVEEIIRLKAA-FPLFFIKWIPGKQNQKADLLAKEAIRLNEKN
4H8K Chain:B ((6-135))----IYTDGGARGNPGPAGIGVVITDEKGNTLHESSAYIGETTNNVAEYEALIRALEDLQMFGDKLVDMEVEVRMNSELIVRQMQGVYKVKEPTLKEKFAKIAHIKMERVPNLVFVHIPREKNARADELVNEAI------


General information:
TITO was launched using:
RESULT:

Template: 4H8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 549 -14919 -27.17 -122.28
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -27.17
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4H8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H8K-query.scw
PDB file : Tito_Scwrl_4H8K.pdb: