Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIFTSFTLDMSK----PEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHG-KIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR
4Z9Y Chain:C ((4-253))-----NSFDLQGKVALITGCDTGLGQGMAIGLAQAGCDIVGVNIVEP-KDTIEKVTALGRRFLSLTADMSNVSGHAELVEKAVAEF---GHVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGKGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLMANEWAKHGINVNAIAPGYMATNNTQQLRADEERSKEILDRIPAGRWGLPQDLMGPSVFLASSASDYINGYTIAVDGGWLAR


General information:
TITO was launched using:
RESULT:

Template: 4Z9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1328 -46134 -34.74 -188.30
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.87

3D Compatibility (PKB) : -34.74
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_4Z9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z9Y-query.scw
PDB file : Tito_Scwrl_4Z9Y.pdb: