Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPHFLILNGPNVNRLGSREPEVFGRQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVVEVHLSNLYAREEFRHQSVIAPVAKGQIVGLGAEGYKLAVRYLLSQQGGESR
1GQO Chain:V ((1-142))-PHFLILNGPNVNRLGSR------RQTLTDIETDLFQFAEALHIQLTFFQSNHEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVVEVHLSNLYAREEFRHQSVIAPVAKGQIVGLGAEGYKLAVRYLLSQQ-----


General information:
TITO was launched using:
RESULT:

Template: 1GQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 676 -107416 -158.90 -789.82
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain V : 0.96

3D Compatibility (PKB) : -158.90
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.709

(partial model without unconserved sides chains):
PDB file : Tito_1GQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GQO-query.scw
PDB file : Tito_Scwrl_1GQO.pdb: