Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNWLNQHKKAIILAASAAVFTAIMIFLATGKNKEPVKQAVPTETENTVVKQEANNDESNETIVIDIKGAVQHPGVYEMRTGDRVSQAIEKAGGTSEQADEAQVNLAEILQDGTVVYIPKKGEETAVQQGGGGSVQSDGGKGALVNINTATLEELQGISGVGPSKAEAIIAYREENGRFQTIED-----ITKVSGIGEKSFEKIKSSITVK
2H5X Chain:B ((74-134))---------------------------------------------------------------------------------------------------------------------------------------------------------LLSVSGVGPRLAMAALAVHDAPALRQVLADGNVAALTRVPGIGKRGAERM-------


General information:
TITO was launched using:
RESULT:

Template: 2H5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 112 -3958 -35.34 -87.96
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -35.34
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2H5X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H5X-query.scw
PDB file : Tito_Scwrl_2H5X.pdb: