Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK
1JL3 Chain:B ((3-139))--NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETGK


General information:
TITO was launched using:
RESULT:

Template: 1JL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 690 -73726 -106.85 -538.15
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain B : 0.99

3D Compatibility (PKB) : -106.85
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.729

(partial model without unconserved sides chains):
PDB file : Tito_1JL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JL3-query.scw
PDB file : Tito_Scwrl_1JL3.pdb: