Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMTMTQQMITIAMVVLG------TMLTRFLPFMIFPSGKPTPKYVQYLGKVLPSAVIGLLVI----------------YCLKDVSLLSGSHGIPELVGAAAVVL----LHLWKKNMLLSIAGGTVVYMVLVQLVF
1GHL Chain:A ((0-129))-GKVYGRCELAAAMKRMGLDNYRGYSLGNWVCAAKFESNFNTGATNRNT-D--GSTDYGILQINSRWWCNDGRTPGSKNLCHIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRKHCKGTDVNVWIRGCRL--


General information:
TITO was launched using:
RESULT:

Template: 1GHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 494 -39040 -79.03 -375.38
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -79.03
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.131

(partial model without unconserved sides chains):
PDB file : Tito_1GHL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GHL-query.scw
PDB file : Tito_Scwrl_1GHL.pdb: