Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSI--QAENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDG-DYYSVMGLPISKTMRALRHFDIRA
4JHC Chain:B ((25-206))----LILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPL-EENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVR----------FKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLR------


General information:
TITO was launched using:
RESULT:

Template: 4JHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 826 -55130 -66.74 -328.15
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -66.74
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_4JHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JHC-query.scw
PDB file : Tito_Scwrl_4JHC.pdb: