Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MTTEKEMKQIQNEFKERMDEGELLNCMRCGFCLPSCPTYIESGFQETHSPRGRIALMKAVADGMIEPDEDVERSLSLCLGCRACEPVCPSGVKYGQLLEEARDIIHQNKKHSLGERVMRKTAFHELFPHQNRMRSAVSLIGLYQRSGLQTAVRKSGMLRVLPEHLRTMEAVLPDVPKS-KDMKHRPRFLPSIGPMKKRVAFFSGCLMDTMFLPTNNATLKLLQLAGCDIVIPPEQACCGALHGHSGEKNTGKELAKQNIAAFEALDVDAVITNAGGCGAFLTEYDHLLKDDPEWSERAAAFVQKLKDFSSVLVE-LDFHQMDLALETPQVVTYQDSCHLRNVMHTSLEPRQLLKSIKGAEFKEMEKADSCCGSAGIYNIVEVEMSMKILDSKMAAVKATEAILIVTANPGCLLQMKLGIE----REGLSGKVRAVHLADLLLEAAGHKTS--
4N5H Chain:X ((1-315))MADEEAMLAKVQASWAQTAARDKARYAD-------------ERVPEDVHWETEYR----------YEQSADPQQTLNLYYPAKRRNATMPTVIDI----------------HGGGW----------FYGDRNLNRNYCRYLAS---QGY--AVMGMGY-RLLPD--VDLRGQIQDIFASLRWLSHF-------GPQR-------GFDLDHVLLTGDSAGGHLASLVACI-----------------QQSAELQELFGVSRVNFN-FTLVALV-------CPVAEPSKLPEAAGDMSDMAAFYLDKLSGGDQALVDHLNFSQV--------------------VKGLDLPPFMLI----GGQNDSF------------------YLQSQALLKVFDANHVTYTTKLWPASAGPHLKHVFNVQHWEWPESIETNLEMLRTFDALSKQQDQAEENE


General information:
TITO was launched using:
RESULT:

Template: 4N5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1743 -8551 -4.91 -27.94
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain X : 0.65

3D Compatibility (PKB) : -4.91
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.292

(partial model without unconserved sides chains):
PDB file : Tito_4N5H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N5H-query.scw
PDB file : Tito_Scwrl_4N5H.pdb: