Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGSMDQSIAVKSPLTYAEALANTIMNTYT-VE-------E---------L-----PPANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNL-----------L-----FRRDELD-AIQAGLILFPLYEQTKDERYVKAAKRLRSLYGT-LNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQE--TELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGDRSDNWLESSGSCLYMYAIAKGINKGYLDR-AYETTLLKAYQGLIQHKTETSEDGAFLVKDICVGTS-AGFYDYYVSRERSTNDLHGAGAFILAMTELEPLFRSAGK
3K11 Chain:A ((28-417))--------TPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVESS--------TDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG-EGFWHQLLDCN---DSYLETSATAIYVYCLAHAINKGWIDAIAYGPVAQLGWHAVAG-KIN--EEGQV--EGTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLLNTQ--


General information:
TITO was launched using:
RESULT:

Template: 3K11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1737 -19225 -11.07 -55.56
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -11.07
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3K11.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3K11-query.scw
PDB file : Tito_Scwrl_3K11.pdb: