Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNDILEFNKTFTEQREYEKYQTSKFPDKKMAILSCMDTRLVELLPHAMNLRNGDVKIIKSAGALVTHPFGSIMRSILVAVYELNADEVCVIGHHDCGMSKISSKSMLEKIKARGIPEERIETIKYSGVDFDQWFKSFDSVEASVKDSVDVIKHHPLFPENVPVHGLVIDPKTGKLDLIVNGYNN
1G5C Chain:D ((2-163))--IIKDILRENQD------------SP----KLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDD---GVIRSAAVAIYALGDNEIIIVGHTDCGMARLDEDLIVSRMRELGVEEEVIENFSI------DVLNPVGDEEENVIEGVKRLKSSPLIPESIGVHGLIIDINTGRL---------


General information:
TITO was launched using:
RESULT:

Template: 1G5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 654 -115207 -176.16 -762.96
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain D : 0.79

3D Compatibility (PKB) : -176.16
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.663

(partial model without unconserved sides chains):
PDB file : Tito_1G5C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1G5C-query.scw
PDB file : Tito_Scwrl_1G5C.pdb: