Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRTEGISTTKIKEEIAGL
1N1D Chain:B ((1-126))MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRTEGISTTKIKEEI---


General information:
TITO was launched using:
RESULT:

Template: 1N1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 555 -56230 -101.32 -446.27
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.98

3D Compatibility (PKB) : -101.32
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_1N1D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1N1D-query.scw
PDB file : Tito_Scwrl_1N1D.pdb: