Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKELFDFTNITPKLFTELRVADKTVLQSFNFDEKNHQIYTTQVASGLGKDNTQSYRITRLSLEGLQLDSMLLKHGGHGTNI--GIENRNGTIYIWSLYDKPNETDKSELVCFPYKAG--ATLDENSKELQRFSNMPFDHRVTPALDMKNRQLAIRQYDTKNNNNKQWVTIFNLDDAIANKNNPLYTIN----IPDELHYLQGFFLDDGYL--YWYTGDTNSKSYPNLITVFDSDNK------------IVLQKEITVGKD--LSTRYENNFREPEGICMYTNPETGAKSLMVG-----ITSG-----KEGNRISRIYAY-------HSYENFMNHVPMLRS--PLLKTVGHQDTPPERFQPFIQTFILEYNAQNKKWMVPTSGYLPSYTSNLVRNIT-INADGNLQVTLNERYISLLHQSIEGDF---------RLKQKDIRMGSWYFAGGEKSNVLEIGFMKGSTKIRPDDAAISNASRMSIFMIVADKIEV---
1IOK Chain:A ((2-526))AAKEVKFN-SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSS------------EVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPQKPLLIVAEDVEIAAVKAPGFGDRRKAMLQDIAILTGGIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGV---IDPAKVVRTALEDAASVAGLLITTEAMIAEKP


General information:
TITO was launched using:
RESULT:

Template: 1IOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1966 99010 50.36 232.42
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 50.36
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.134

(partial model without unconserved sides chains):
PDB file : Tito_1IOK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IOK-query.scw
PDB file : Tito_Scwrl_1IOK.pdb: