Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLG--KLVIGTSENVIP-------LIVPVLPEATYWRDGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVL-TADCPVILDAGA---LAKRTYPKREGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGD-CWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE
3RTG Chain:A ((218-501))INRYVITREMVRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQEC-LELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLEKPAVIDADAINVLDTSVLKERKSPAVLTPHPGEMARLVKKTVGDV-KYNYELAEEFAKENDCVLVLKSATTIVT--DGEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQGLSPLEASTVSVYLHGFAAELF--EQDERGLTASELLRLIPEAIRRLK


General information:
TITO was launched using:
RESULT:

Template: 3RTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1679 -2150 -1.28 -7.96
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -1.28
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_3RTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RTG-query.scw
PDB file : Tito_Scwrl_3RTG.pdb: