Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MQQTAWAPRTSGIAGCGAGGVVMAIASVTLVTDTPGRVLTGVAALGLILFASATWRARPRLAITPDGLAIRGWFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVSGGLLILSRWDLGTDPVEVLDALTAAGYAGRGQR
4PQL Chain:A ((1-131))
QNQYFTVQENYKERFYQI-------------PKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQK--RRGLNKPNILYLMKPIVTERDIYKIEKEENDVEP
General information:
TITO was launched using:
RESULT:
Template:
4PQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44543 for 785 contacts (-56.7/contact) +
2D Compatibility (PS) -13250 + (NN) -2895 + (LL) 984
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -61804.0 ( -78.73 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_4PQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PQL-query.scw
PDB file :
Tito_Scwrl_4PQL.pdb
: