Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVLSTAFSQMFGIDYPIVSAPMDLIAGGELAAAVSGAGGLGLIG----------------GGYGDR-----------------------DWLARQF-DLAAGAPVGCGFITWSLARQPQLLDLALQYEPVAVMLSFGDPAV-FADAIKSAGTRLVCQIQNRTQAERALQVGADVLVAQGTEAGGH--------GHGPRSTLTLVPEIVDLVTARGTDIPVIAAGGIADGRGLAAALMLGAAGVLVGTRFYATVEALSTPQARDPLLAATGDDMCRTTIYDQLRRYPWPQGHTMSVLSNALTDQFEDTELDILHREEAMARYWRAVAARDYSIANVTAGQAAGLVNAVLPAADVITGMAQQAARTLTAMRAV |
4Q4K Chain:B ((2-268)) | ---TDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALV----RLLAARGS-LPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREAL---KGPRAARTAL--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145284 for 1670 contacts (-87.0/contact) +
2D Compatibility (PS) -23626 + (NN) -13026 + (LL) 9424
1D Compatibility (HY) -13600 + (ID) 4600
Total energy: -190712.0 ( -114.20 by residue)
QMean score : 0.411
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