Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDDADLDLVRRTFAAFARGDLAELTQCFAPDVEQFVPGKHALAGVFRGVDNVVACLGDTAAAADGTMTVTLEDVLSN-TDGQVIAVYRLRASRAGKVLDQREAILVTVAGGRITRLSEFYADPAATESFWA
1TUH Chain:A ((27-156))
-EAEQNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLLHVLKSDD-GRVIGIHRNTAERGGKRLDVGCCIVFEFKNGRVIDGREHFYDLYAWDEFWR
General information:
TITO was launched using:
RESULT:
Template:
1TUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81815 for 947 contacts (-86.4/contact) +
2D Compatibility (PS) -14101 + (NN) -2976 + (LL) 132
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -105610.0 ( -111.52 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1TUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TUH-query.scw
PDB file :
Tito_Scwrl_1TUH.pdb
: