Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDE--AGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRK---LAWF-GPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQAFAGPPGRGR |
| 2NSF Chain:A ((28-251)) | --PLEERLTLARLGTSHYSRQLSLVDNAEFGEHSLLEGWTRSHLIAHVAYNAIALCNLMHWANTGEETP----MY-VSPEARNEEIAYGSTLNPDALRNLHEHSVARLDVAWRETSEDAWSHEVLTAQGRTVPASETLWMRSREVWIHAVDLGAVATFGDIPEVILRTLAAEITQK--WT--SQGAG---EGLVLLDEP-SSTRYPAAPGQDEVVVSGSLAGIVRYAAGRGS-D--GVTSST--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82123 for 1671 contacts (-49.1/contact) +
2D Compatibility (PS) -23635 + (NN) -15929 + (LL) 2632
1D Compatibility (HY) -800 + (ID) 1450
Total energy: -121305.0 ( -72.59 by residue)
QMean score : 0.402
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