Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVARA--SSSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
3L9F Chain:A ((37-203))
-GKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVIQ--DGRPNKNIYAITESGKKELASYLQSDVNDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKGELTPTQEITIKYGLAQYKSTKKVLEEELA------------
General information:
TITO was launched using:
RESULT:
Template:
3L9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60575 for 995 contacts (-60.9/contact) +
2D Compatibility (PS) -17932 + (NN) -6048 + (LL) 784
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -94021.0 ( -94.49 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3L9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9F-query.scw
PDB file :
Tito_Scwrl_3L9F.pdb
: