Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTGQRWRGTLPGRRPWTRPAPATCRRHLAFVELRHYFARVMSSAIGSVARWIVPLLGVAAVASIGVIADPVRVVRAPALILVDAANPLAGKPFYVDPASAAMVAA---RNANPPNAELTSVANTPQSYWLDQAFPPATVGGTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASGGFATGTDYRGWIDAVASGLGSSPATIIVEPDALAMA-DCLSPDQRQERFDLVRYAVDTLT-RDPAAAVYVDAGHSRWLSAEAMAARLNDVGV-GRARGFSLNVSNFYTTDEEIGYGEAISGLTN--GSHYVIDTSRNGAGPAPDAPLNWCNPSGRALGAPPTTATAGAHADAYLWIKRPGESDGTCGRGEPQAGRFVSQYAIDLAHNAGQ |
| 2BOG Chain:X ((2-286)) | --------------------------------------------------------------------------------------------DSPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAHHN-PGQITGQVDALMSAAQAAGKIPILVVSNAPGRDCG------APSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCM-QHVQQEVLETMAYAGKALKAGSSQARIYFDAGHSAWHSPAQMASWLQQADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPA---GNEWCDPSGRAIGTPSTTNTGDPMIDAFLWIKLPGEADGCIA----GAGQFVPQAAYEMAIAA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128820 for 2397 contacts (-53.7/contact) +
2D Compatibility (PS) -29185 + (NN) -13737 + (LL) 6908
1D Compatibility (HY) -14800 + (ID) 5550
Total energy: -185184.0 ( -77.26 by residue)
QMean score : 0.575
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