Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKE--SISNAPHLLDAEVGHALRRAVLSDEISEEQARAALDALPYLIDNRYPHSPRLIEYTWQL--R-----HNVTFYDALYVALATALDVPLLTGD-SRLAAAPGLPCEIKLVR
5ECD Chain:A ((8-131))
-LKFMLDTNICIFTIKNKPAS---VRERFNLNQGKMCISSVTLMELIYGAEKSQM-----PERNLAVIEGFVS-RIDVLDYDAAAATHTGQIRAELARQGRPVGPFNQMIAGHARSRGLIIVTNNTREFERVGG---------
General information:
TITO was launched using:
RESULT:
Template:
5ECD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56808 for 839 contacts (-67.7/contact) +
2D Compatibility (PS) -13168 + (NN) -9379 + (LL) 2032
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -81223.0 ( -96.81 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_5ECD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5ECD-query.scw
PDB file :
Tito_Scwrl_5ECD.pdb
: