Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------MLFAALR---DMQWRKRRLVITIISTGLIFGMTLVLTGLANGFR-------VEARHTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAA--PLGSVGTIMKEGT-STRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVF--LTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAV--NDLVRP-------LKVAVNSISIVA---VLLWIVAVL---------IVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQA-----LVIALLAAVVGVVLAQVLAPLFPMIVA-VPVGAYLALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
| 4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYT----SPVGYLFGAITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVGDDLLPSICGYGFS-----GYMAVAIMGLYLGDALFRADDIDYKYIVSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209432 for 2778 contacts (-75.4/contact) +
2D Compatibility (PS) -34622 + (NN) -7639 + (LL) 436
1D Compatibility (HY) -25200 + (ID) 3000
Total energy: -279457.0 ( -100.60 by residue)
QMean score : 0.083
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