Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPKRSRLVV---------------CAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDR------QIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
2FZV Chain:A ((23-257)) | NAMRLRHLSDPDSLPALDKSFAIERPALGLAPDAPPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA------ETRIFDPSDLPLP---DQVQSDDHPAVKELRALSEWSEGQVWCSPERHGQITSVMKAQIDHLPLEMAGIR-----------PTQGRTLAVMQVSGGSQSFNAVNTLRLLGRWMRMFTIPNQSSIAKAFQEFD------------------------------AAGRMKPSPYYDRIADVMEELVRFTALVRPHREALTDRYSERKAAGHVI--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -52969 for 1716 contacts (-30.9/contact) +
2D Compatibility (PS) -23310 + (NN) -17549 + (LL) 2852
1D Compatibility (HY) 4000 + (ID) 1100
Total energy: -88076.0 ( -51.33 by residue)
QMean score : 0.160
|
|
|