Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYLA-GAAQIGGVMVGAPLVIGMTRQVRARWEGRAGAGLLQPWRDLLKQLGKQQITPAGTTIVFAAAPV-----IVAGTTLLIAAIAPLVAT-----GSPLDPSADLFAVVGLLFLGTVALTLAGIDTGTSFGGMGASREITIAALVE---PTILLAVFALSIPAG---SANLGALVASTIDHPGH-VVSLAGVLAFVALVI------------VIVAETG--RLPVDNPATHLELTMVH--------------------EAMVLEYAGPRLALVEWAAGMRLTVLLALLANLFLPWGIAGAAPTALDVLTGVVAVAAKVAILAVLL----ATFEVFLAKLRLFRVPELLAGSF--------LLALLAVTAANFFTVGA------------------ |
| 4KBL Chain:A ((101-554)) | YRYEVLTAEQILQHMVECIREVNEVIQ---NPATITRILLSHFNWDKEKLMERYFDGNMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183969 for 2019 contacts (-91.1/contact) +
2D Compatibility (PS) -32250 + (NN) -6666 + (LL) 436
1D Compatibility (HY) -10000 + (ID) 2400
Total energy: -234849.0 ( -116.32 by residue)
QMean score : 0.099
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