Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVYKHAPSRVRLRQTRSTVVKGRSGSLSWRRVRTGDLGLAVWGGREEYRAVKPGTPGIQPKGDMMTVTVVDAGPGRVSRSVEVAAPAAELFAIVADPRRHRELDGSGTVRGNIKVPAKLVVGSKFSTKMKLFGLP-YRITSRVTALKP-NELVEWSH---PL---GHRWRWEFESLS-PTLTRVTETFDYHAAGAIKNGLKFYEMTGFAKSNAAGIEATLAKLSDQYARGRA |
4N0G Chain:C ((6-163)) | ------------------------------------------------------------------------QKRCRSSVVETIEAPLPLVWSILRSFDKPQAYQRF--VKSCTMR----GKGSVRDVTLVS-GFPADFSTERLEELDDESHVMVVSIIGGNHRLVNYKSKTKVVASPE-KKTVVVESYVVDVPEGTS--EEDT-----IFFVDNIIRYNLTSLAKLTKKMM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15082 for 956 contacts (-15.8/contact) +
2D Compatibility (PS) -14690 + (NN) -3034 + (LL) 4268
1D Compatibility (HY) -400 + (ID) 1000
Total energy: -29938.0 ( -31.32 by residue)
QMean score : 0.386
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