Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKNQNRIRNRWELITCGLGGHVTYAPDDAALAARLRASTGLGEVWRCLRCGDFALGGPQGRGAPEDAPLIMRGKALRQAIIIRALGVERLVRALVLALAAWAVWEFRGARGAIQATLDRDLPVLRAAGFKVDQMTVIHALEKALAAKPSTLALITGMLAAYAVLQAVEGVGLWLLKRWGEYFAVVATSIFLPLEVHDLAKGITTTRVVTFSINVAAVVYLLISKRLFGVRGGRKAYDVERRGEQLLDLERAAMLT |
| 2K9Y Chain:A ((523-563)) | -------------------------------------------------------------------------------------------------------------------------------------------EFQTLSPEGSGNLAVIGGVAVGVVLLLVLAGVGFFIHRRRK---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5835 for 164 contacts (-35.6/contact) +
2D Compatibility (PS) -4339 + (NN) -371 + (LL) 18004
1D Compatibility (HY) -3600 + (ID) 450
Total energy: 3409.0 ( 20.79 by residue)
QMean score : -0.026
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