Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVTVM--GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLD---VR-WVVALIVI---NLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
2XOV Chain:A ((2-180))
----------------------------------RAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFS--GPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSL-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137722 for 1367 contacts (-100.7/contact) +
2D Compatibility (PS) -17058 + (NN) -2746 + (LL) 5924
1D Compatibility (HY) -12800 + (ID) 1750
Total energy: -166152.0 ( -121.54 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_2XOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOV-query.scw
PDB file :
Tito_Scwrl_2XOV.pdb
: