Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPN-GVVLTNNHVIAGATDINAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASD-SLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQ---GFAIPIGQAMAIAGQIRSGG-------GSPTVHIGPTAFLGLGVVDNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 3PV3 Chain:B ((79-338)) | ------------------------------------------------------------------------------GSGVIIDPNNGVIITNDHVIRNASLI-TVTLQDGRRLKARLIGGDSETDLAVLKI-DAKNLKSLVIGDSDKLEVGDFVVAIGNPFGL--SQSATFGIVSAL----KRSDLN----E----NFIQTDAAINPGNAGGALVNAKGELIGINTAILSPY----GGNVGIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPE-DFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVE------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128774 for 1809 contacts (-71.2/contact) +
2D Compatibility (PS) -26135 + (NN) -13101 + (LL) 5576
1D Compatibility (HY) -16800 + (ID) 4550
Total energy: -183784.0 ( -101.59 by residue)
QMean score : 0.354
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