Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSDTLATKLPWSDWLSRQRWYAGRNRELATVKPGVVVALRHNLDLVLVDVTYTDGATERYQVLVGWDFEPASEYGTKAAIGVADDRTGFDALYDVAGPQFLLSLIVSSAVCGTSTGEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVS--SGINPDIELNRVLTRAGN-PHVARLLGAYQFGRPNRSPTDALAYALGMVTEYEANAAEGWAMATASVRDLFAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGTA---QATFPVDRMLARLSSTVAVVP---EL-REYAPTIEQQFQKLAA---E-AITVQRVHGDLHLGQVLRTPES-WLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYETGYET-RHRPGWLPIPLRSIARLTAS |
| 4DCA Chain:A ((40-307)) | -------------------------------------------------------------------------------------------------------------------------------------NELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ--------S-------DRFNIMKYIKGERITYEQ-YHKL-------------SEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGD---------FNVGDPDNDFLCLLDCST--------------------DDFGKEFGRKVLKYYQHKAPE---VAERKAELNDVYWSIDQIIYGYERKDREMLIKDV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57366 for 1759 contacts (-32.6/contact) +
2D Compatibility (PS) -25502 + (NN) 4915 + (LL) 12740
1D Compatibility (HY) -10400 + (ID) 1700
Total energy: -77313.0 ( -43.95 by residue)
QMean score : 0.257
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