Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSIDVVVEAVVTFAGAAGFAHTLAPLRRGQQDPCFRVPGDGTIWRTSLLPTGPVTARISRAGRDAARCVAWGSGAEEFVDMAPAMLGAADDASDFVPLHPAVAAAHRRLPNLRLGRTGQVLEALIPAVIEQRVPGADAFRSWRLLVSKYGTQAPGPAPPGMRVPPSAEVWRHIPSWEF----HRANVDPGRARAVVGCAQRAASLERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTLVGRP----VDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRLPVQNIRAL |
1KEA Chain:A ((32-192)) | ---------------------------------------------------------------------------------------------------------------------TRDPYVILITEILLRRTTAGHVKKIYDKFFVKY---------------KCFEDILKTPKSEIAKDIKEIGLSNQRAEQLKELARVVINDY---GGRVPRNRKAILDLPGVGKYTCAAVMCLAFGKKAA-MV-DANFVRVINRYFGGSYENLNYNHKALWELAETLVPGGKCRDFNLGLMDF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49188 for 1088 contacts (-45.2/contact) +
2D Compatibility (PS) -16655 + (NN) -7562 + (LL) 8676
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -71179.0 ( -65.42 by residue)
QMean score : 0.358
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